Timofey Prodanov, Ph.D.

PostDoc

timofey.prodanov

hhu.de

Timofey Prodanov received his B.Sc. in Computer Science in 2015 and M.Sc. in Algorithmic Bioinformatics in 2017 in St. Petersburg, Russia. Since then, Timofey has worked as a PhD Researcher under the supervision of Prof. Dr. Vikas Bansal at the University of California San Diego. During his PhD research, Timofey analyzed segmental duplications in the human genome and developed several bioinformatical tools, including DuploMap, Parascopy and Pileuppy. Timofey joined the Marschall Lab in August 2022.

Publications

Structural and genetic diversity in the secreted mucins MUC5AC and MUC5B

The American Journal of Human Genetics, August 8, 2024

Plender EG, Prodanov T, Hsieh P, Nizamis E, Harvey WT, Sulovari A, Munson KM, Kaufman EJ, O’Neal WK, Valdmanis PN, Marschall T, Bloom JD, Eichler EE

Locityper: targeted genotyping of complex polymorphic genes

bioRxiv, May 6, 2024

Full text

Prodanov T, Plender EG, Seebohm G, Meuth SG, Eichler EE, Marschall T

Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project

bioRxiv, April 20, 2024

Schloissnig S, Pani S, Rodriguez-Martin B, Ebler J, Hain C, Tsapalou V, Söylev A, Hüther P, Ashraf H, Prodanov T, Asparuhova M, Hunt S, Rausch T, Marschall T, Korbel J

Legend: * joint first author; † joint last author