Hufsah Ashraf, M.Sc
PhD Student
hufsah.ashraf
hhu.de
Hufsah received her Bachelor's degree in Bioinformatics from International Islamic University, Pakistan in 2015. She completed her Master's degree in Computational Sciences and Engineering from National University of Sciences and Technology, Pakistan in 2017. In September 2019, she started her PhD at University of Saarland, Saarbrücken and later moved to Universitätsklinikum Düsseldorf in July 2020. Her current research interests include Genomic structural variation, Genotyping & Haplotype phasing and Pangenomics .
Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project
bioRxiv, April 20, 2024
Schloissnig S, Pani S, Rodriguez-Martin B, Ebler J, Hain C, Tsapalou V, Söylev A, Hüther P, Ashraf H, Prodanov T, Asparuhova M, Hunt S, Rausch T, Marschall T, Korbel J
Allele detection using k -mer-based sequencing error profiles
Bioinformatics Advances, October 20, 2023
Inversion polymorphism in a complete human genome assembly
Genome Biol, April 30, 2023
Porubsky D, Harvey WT, Rozanski AN, Ebler J, Höps W, Ashraf H, Hasenfeld P, Human Pangenome Reference Consortium (HPRC), Human Genome Structural Variation Consortium (HGSVC), Paten B, Sanders AD, Marschall T, Korbel JO, Eichler EE
Recurrent inversion polymorphisms in humans associate with genetic instability and genomic disorders
Cell, May 26, 2022
Porubsky D*, Höps W*, Ashraf H*, Hsieh P, Rodriguez-Martin B, Yilmaz F, Ebler J, Hallast P, Maria MFA, Harvey WT, Henning B, Audano PA, Gordon DS, Ebert P, Hasenfeld P, Benito E, Zhu Q, Lee C, Antonacci F, Steinrücken M, Beck CR, Sanders AD, Marschall T†, Eichler EE†, Korbel JO†
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
Science, February 25, 2021
Ebert P*, Audano PA*, Zhu Q*, Rodriguez-Martin B*, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, Lin J, Rausch T, Chen Y, Ren J, Santamarina M, Höps W, Ashraf H, Chuang NT, Yang X, Munson KM, Lewis AP, Fairley S, Tallon LJ, Clarke WE, Basile AO, Byrska-Bishop M, Corvelo A, Evani US, Lu TY, Chaisson MJP, Chen J, Li C, Brand H, Wenger AM, Ghareghani M, Harvey WT, Raeder B, Hasenfeld P, Regier AA, Abel HJ, Hall IM, Flicek P, Stegle O, Gerstein MB, Tubio JMC, Mu Z, Li YI, Shi X, Hastie AR, Ye K, Chong Z, Sanders AD, Zody MC, Talkowski ME, Mills RE, Devine SE, Lee C†, Korbel JO†, Marschall T†, Eichler EE†
Legend: * joint first author; † joint last author
